Viral vector vaccine testing and characterisation

The viral vector landscape is evolving fast.

 

With over 1,000 gene therapy clinical trials underway globally and new platform technologies emerging, developers face mounting pressure to demonstrate product quality, safety and consistency to increasingly demanding regulators.


RSSL brings over 35 years of MHRA-inspected, FDA-audited analytical expertise to this challenge designing fit-for-purpose strategies that adapt as your programme evolves from early development through to GMP batch release and commercialisation.

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Multi-platform experience

(proteins, viruses, mRNA, viral vectors)

Purpose-built biologics laboratory

Method development, validation & transfer

Integrated workflows with no handoff delays

Fast, reliable turnaround

Pharmacopeial experience 

Our core analytical capabilities

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Identity testing

Vector identity and sequence verification

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Purity Analysis

Process & product-related impurity profiling

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Viral Titre & P:I Ratio

Total and functional titre determination

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Transgene Expression & Potency

Functional activity and potency confirmation

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Biosafety

Regulatory safety compliance

Identity Testing

 

Vector identity is confirmed through characterisation of the genetic sequence, genome integrity and capsid protein composition to ensure that the correct product is manufactured and released in accordance with regulatory requirements.

 

Capsid Molecular Identity DNA Sizing and Genomic Stability
Capillary Electrophoresis (CE-SDS)  CE-SDS 
High-Resolution Liquid Chromatography Mass Spectrometry (HR-LC-MS)  qPCR/PCR  
SDS-PAGE  Restriction Enzyme mapping 
Immunoassay-based methods (ELISA, Western Blot)   

 

 

Purity analysis

 

We accurately assess the purity of your viral vector products by detecting and quantifying contaminants and process and product-related impurities including host cell proteins, residual DNA and empty capsids, supporting regulatory compliance and consistent product quality.

 

Process related impurities

 

  • Host Cell Proteins (HCPs)
  • Host Cell DNA (HCD) and Residual Plasmid DNA: qPCR and PicoGreen assays
  • Residual Benzonase: ELISA 
  • Residual Purification and Transfection Reagents (e.g., CsCl): HPLC 
  • Residual RNA: Quantified using nucleic acid–based analytical methods

 

 

Product related impurities

 

Molecular variants of viral vector that contribute to the overall purity assessment and may ultimately impact potency and safety. According to ICH Q6B guidelines, these impurities must be characterised and controlled throughout the manufacturing process and for batch release.

 

Examples include empty:full capsid ratio, defective or immature viral particles, aggregates and others.

 

Empty:full capsid characterisation Aggregates
Liquid Chromatography (SEC or IEX)  Size Exclusion Chromatography (SEC) 
Capillary Electrophoresis Dynamic Light Scattering (DLS) 

 

 

 

Viral Titre and P:I Ratio Determination

 

Accurate measurement of viral particle titer and infectivity is critical to ensuring reliable dosing, product consistency, and therapeutic efficacy. Validated analytical methods are used to quantify total and functional viral titers, supporting robust product characterization and batch-to-batch reproducibility.

Physical Titer

 

Quantified using ELISA and HPLC 

Genomic Titer

 

Determined using qPCR 

Infectious Titer

 

Assessed using advanced cell-based infectivity assays 

Particle-to-Infectivity (P:I) Ratio

 Calculated through integrated analysis of physical, genomic, & infectious titer measurement

Transgene Expression and Vaccine Potency Testing

 

We evaluate functional activity and expression of your transgene to confirm therapeutic efficacy.  RSSL can also perform assays for infection dynamics (kinetics) studies via cell-based assays with multiple endpoints such as qPCR and ELISA.

 

Transgene/Protein Expression Analysis   Potency and Functionality  
Protein Expression: Immunoassays such as ELISA and Western Blotting  A range of cell-based assays, including reporter cell lines 
mRNA Expression: RT-qPCR  Infection dynamics (kinetics) studies via cell-based assays with multiple endpoints (e.g., qPCR, ELISA) 

 

 

Biosafety

 

We provide rapid, sensitive, and compliant biosafety testing services to ensure the safety and quality of your biotherapeutic products including, mycoplasma, endotoxin and sterility testing. Our assays help mitigate contamination risks and support regulatory approval at every stage of development and manufacturing.

Ready to accelerate your viral vector vaccine development? 

 

Put 35 years of MHRA-inspected, FDA-audited analytical expertise at your disposal. With full UKAS accreditation our fully compliant analysis will support projects large and small.


Get in touch to discuss how RSSL can support your project.

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Frequently asked questions

  • Batch release typically includes identity, purity, potency, sterility, endotoxin, mycoplasma, viral titre and particle characterisation. All performed in RSSL's MHRA-inspected laboratories and aligned with ICH Q6B.

  • Outsourcing to an MHRA-inspected, UKAS-accredited partner like RSSL provides immediate access to validated methods, regulatory experience, and qualified scientists — without the cost of building in-house GMP capability.

  • Impurities such as host cell proteins, residual DNA, and empty capsids can impact patient safety, efficacy, and immunogenicity. Comprehensive profiling using orthogonal techniques ensures regulatory compliance and consistent product quality.

  • Methods are developed and validated using orthogonal techniques (chromatography, electrophoresis, mass spectrometry, immunoassays) to provide comprehensive impurity profiles satisfying MHRA, FDA, and EMA expectations.

  • Start-ups gain immediate access to GMP infrastructure, regulatory expertise, and validated methods — enabling faster IND/CTA submissions without capital expenditure, reducing time-to-clinic by months.

  • Total DNA is quantified using PicoGreen® fluorescence assays, while host-specific hcDNA is detected via qPCR for relevant production hosts (E. coli, CHO, HEK293) aligned with USP <509>.

  • We use cell-based potency assays (including reporter cell lines), infection kinetics studies, and immunoassays (ELISA, western blot) to confirm transgene expression and functional biological activity.